PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94798.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 339aa MW: 37748.7 Da PI: 7.6498

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.7	1.2e-07	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F+r nL+ H+r H RWR94798.1 177 HYCHICGKGFKRDANLRMHMRAH 199 68*******************99 PP
2	zf-C2H2	11.2	0.0011	272	295	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + RWR94798.1 272 YVCNRCNqKQFSLLSDLRTHEKHC 295 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MIPSSSTAIS ETAIHSNSLL CNLSILRDKV QQVQSLVDVV VLPDQGRGDS VATAFSGMES 60 LIQEIIVAAS SMMYTCRKMS LEAMVHKGGK VSNDGHSQPR IDEFDHAISI GEGDDKGFFS 120 GETSEVYHEN LSYNGNGDDE AELHDGVQMS KGLCDFSSMN NNIIELDAAD LLARYTHYCH 180 ICGKGFKRDA NLRMHMRAHG DQYKSNAALS NPSKSSNSGL MGQKDYSSDS PRKYSCPQEG 240 CRWNKKHPKF QPLKSMICVK NHYKRSHCPK MYVCNRCNQK QFSLLSDLRT HEKHCGDLKW 300 QCSCGTTFSR KDKLMGHVAL FIGHTPAMNC IVEPERFGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-94	C2H2 family protein