PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94530.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 400aa    MW: 44923.7 Da    PI: 9.1729
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-0781121445
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      WT+eE  +l d+++q+  + +  Ia +++  R+ +++ksr++
       RWR94530.1  81 WTKEETNQLFDLCEQFDLR-FIVIADRFPSSRSVEELKSRYY 121
                      *******************.*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MCKGEGAVSF NAEVGLRGIT WQWLTFSNSA RTDNLQLSHW VRVVNGVPPT GDYSFAKYNK  60
SVDILKYSDE EYEKHLTDPM WTKEETNQLF DLCEQFDLRF IVIADRFPSS RSVEELKSRY  120
YAVCKALLIA RAPSSGDVSE HPLVKEPYNI TQEVDRKRAL STVFSQTKQQ ERKDAEILAE  180
AKRIAESRMI NKGAEESDLL VNTNVGPEGI EKSTMAIESG LHSSSVQPRA TPVAPSTSTA  240
DSASIPASLR MLRVYLRTQV LDQMVQTANS SAGVRTIKRV EQTLQDLEVH VKPKVPTKAV  300
CTQYLELRKE ILTLLNLQRQ LQYKEAEASG QHESSYVDTP STPKRSHRGD QDRPFVPDSV  360
AYGGERVGKR EHKRKAPGRF SEAPPSPPQG KRPRKMKASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.11e-169MYB_related family protein