PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | GRAS | ||||||||
Protein Properties | Length: 95aa MW: 10843.9 Da PI: 4.5389 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 31.3 | 2.6e-10 | 7 | 88 | 165 | 251 |
GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse 251 L k+++ + +f f+v ++++++d++ + +++++E++ V + l ++l+++ +l +++++k+l+P +++v+e ea+hn RWR94293.1 7 LVKICQDPEFTFLFQV-IVSDMKDIKEDLSDFDSDEVVGVYAPMILRTMLARPNCLGI----LMEVMKNLNPSIMIVTEVEANHNPL 88 77888888999****9.7999****9888899******************99999999....**********************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MKACKWLVKI CQDPEFTFLF QVIVSDMKDI KEDLSDFDSD EVVGVYAPMI LRTMLARPNC 60 LGILMEVMKN LNPSIMIVTE VEANHNPLQC VVRLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 8e-07 | GRAS family protein |