PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94288.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 303aa MW: 34591.6 Da PI: 4.4933

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	8.9e-10	238	270	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+++LA+ +gL+++q+ +WF N+R ++ RWR94288.1 238 PYPTEEEKAKLAEVTGLDQKQINNWFINQRKRH 270 8*****************************885 PP
2	ELK	37.7	4.4e-13	190	211	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sL++EF+ RWR94288.1 190 ELKQMLLRKYSGYLSSLRKEFL 211 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MDDFYRHDPS ISCADSGNFD NLLRFEGDFE VRRNETEICA SEMSDLIKAQ IASHPKYPSL 60 VSAYIECRKV GAPPEMATLL EEIGRENLPN PVCTEIGTDL ELDEFMDSYC EVLMRYKEEL 120 SRPFDEATTF LNSIESQLSN LCKVTSSTTS TTTGNEQSDE AAGSSEEELS YGEAEVSENQ 180 EASSCHGDQE LKQMLLRKYS GYLSSLRKEF LKKKKKGKLP RDARLTLLDW WNTHYRWPYP 240 TEEEKAKLAE VTGLDQKQIN NWFINQRKRH WKPSEDMRFA LMEGVSGMGG SFPLYFDTGT 300 DVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-85	TALE family protein