PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94264.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 354aa MW: 40245.7 Da PI: 5.0778

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94264.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl RWR94264.1 14 RGRWTAEEDEILMRYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	55.2	1.6e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+el+++++ +G++ W++Ia +++ gRt++++k++w+++l RWR94264.1 67 RGNISPEEEELIIKLHSSYGNR-WSLIAGHFP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGRAPCCEKV GLKRGRWTAE EDEILMRYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SPEEEELIIK LHSSYGNRWS LIAGHFPGRT DNEIKNYWNS HLSRRIHSFR 120 RLNNDGAPIL DVGNIVGGYK RKGGRTRRSA MKKNNTYLEV RREKVQARAG TFSTKPLPEK 180 PTQKAVLSKD NEVPVAPSVD KVNDVMEPQG QFEGMESWIA GSTTTDSESG IFVSNKGLEN 240 DFFLSYEVVE GEGGVTGFIE ERENGILGSK EGSESGVTVS KEERENGGNE KDREWCSSVD 300 NSFEEMGYLY EEWLDWKWDG VEDMVREEDS GERWSWLWES DNEEGNSLAM GHQQ

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGRAPCCEKV GLKRGRWTAE EDEILMRYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SPEEEELIIK LHSSYGNRWS LIAGHFPGRT DNEIKNYWNS HLSRRIHSFR  120
RLNNDGAPIL DVGNIVGGYK RKGGRTRRSA MKKNNTYLEV RREKVQARAG TFSTKPLPEK  180
PTQKAVLSKD NEVPVAPSVD KVNDVMEPQG QFEGMESWIA GSTTTDSESG IFVSNKGLEN  240
DFFLSYEVVE GEGGVTGFIE ERENGILGSK EGSESGVTVS KEERENGGNE KDREWCSSVD  300
NSFEEMGYLY EEWLDWKWDG VEDMVREEDS GERWSWLWES DNEEGNSLAM GHQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	5e-75	MYB family protein