PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94195.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 288aa    MW: 32116.9 Da    PI: 5.0857
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-1961109355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ +++++g
  RWR94195.1  61 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDKEARRIRG 109
                 9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MCGGAIIADF IPRNRPRRVS GSDLWPEPSF LSTAQTKPFP SPSEEEIAED KTTKRKRKNL  60
YRGIRQRPWG KWAAEIRDPR KGVRVWLGTF NTAEEAARAY DKEARRIRGK KAKVNFPNEG  120
EQQLDNNTTT QMNMQMQKPI PSYYNGYDHN NINAPQELDF GFVGAPNFTQ IGAESCNSAV  180
SVPSGCLTSG SGLNGRDVPV VMGRMKEEAV MVDETRVKNL SEELSAFESF MKLIEIPYMD  240
GGVDQQQQQQ QQQVALNPVQ ESDIGDLWNF VGDDVLASDM AASSNAAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-42ERF family protein