PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94037.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 312aa MW: 35290.6 Da PI: 5.1583

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	256	289	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+++q+ +WF N+R ++ RWR94037.1 256 WPYPTEADKIALAESTGLDQKQINNWFINQRKRH 289 59*****************************885 PP
2	ELK	38.2	3e-13	209	230	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+ LlrKYsgyL+sLkqEFs RWR94037.1 209 DLKDKLLRKYSGYLSSLKQEFS 230 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MDDIYGLHAV HYSPQQSISP ENLAASQADL QSILGFRDRV QGFGPDPVFP GSAISDATIS 60 PEIRHDEISS VIKAKIASHP RYPRLLEAYI DCQKVGAPPE IASLLDEVRR ENDMSKRNAS 120 GSTRLGADPE LDEFMDTYYD VLVKYKSDLT RPFDEATTFL NSIELQLSNL CKGSSRTCPS 180 DELAGSSEEE LSGGEVEVQE NPSRGEDRDL KDKLLRKYSG YLSSLKQEFS KKKKKGKLPK 240 EARQTLLDWW NIHLKWPYPT EADKIALAES TGLDQKQINN WFINQRKRHW KPSENMQFAV 300 MDSISAPFYL DN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-109	TALE family protein