PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93936.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Dof

Protein Properties

Length: 312aa MW: 34390.6 Da PI: 7.049

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93936.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.8	3.1e-40	55	114	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknkk+ RWR93936.1 55 HEQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKNKKV 114 7899******************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MSINSPPQAC METPDWRQIC HGALDDEAMT GSSSPSDEII ACPRPMIERR ARPQHEQALK 60 CPRCDSTHTK FCYYNNYSLS QPRYFCKSCR RYWTKGGSLR NVPVGGGCRK NKKVVAKKTS 120 DPPPDQHFYV SHDVPDQRFS FPGMQFSHLN TLLSMSGDPN SMECKYDTSP TLGNLRHVDF 180 MKDKLDAVLG NSRTYSFMGT NDLGHLGGGV GDMSHGFTST SNHGSCSSYG FNMDGTQAPY 240 MGIGEKMLLP FAGGEDPNAV DIKPSNRLLS LEWEDQGCSE VQRDPLGHMM NGLGSWSGTM 300 NGYGPSTTNP LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-36	Dof family protein