PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93890.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 281aa    MW: 30779.3 Da    PI: 4.8626
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1798148155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++kGVr++k +g+++AeIrd +     r  r++lg+f taeeA++a+++a +++e+
  RWR93890.1  98 PKIKGVRRRK-WGSFAAEIRDpF-----RgGRVWLGTFKTAEEAKAAYDNASREIEK 148
                 79*****998.**********66.....569********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MAQDKKIFRR VKKSDIEEGK TMRKIRILCN DPDATDSSSE DEESNHMKSN KKKRSEGSKR  60
VVTEFHVPVH SETESSVHDS KAKNPPRRVL PKSTSPAPKI KGVRRRKWGS FAAEIRDPFR  120
GGRVWLGTFK TAEEAKAAYD NASREIEKAM KKNPIPDSSV EAAAAAASSS CASECSETII  180
PPSTPSSVLD ISTPSSVVNG CSTSVTEKPD SVKIAEPTND FMGLSFIDFD SAFIDSFGGE  240
DFFDLGAALD DIPLSGFEEE DTDLSGFDLE FDPEAISWMN L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101107KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.19e-19ERF family protein