PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR93352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | RAV | ||||||||
Protein Properties | Length: 345aa MW: 39438.5 Da PI: 8.9292 | ||||||||
Description | RAV family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.6 | 1.5e-08 | 39 | 85 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 ++kGV +g W ++I+ + +r++lg+f +++eAa a++ a kl+ RWR93352.1 39 RFKGVVLQQ-NGHWGSQIYA------NhQRIWLGTFKSEQEAALAYDSASIKLR 85 589998777.8******999......44**********99*********99997 PP | |||||||
2 | B3 | 89.1 | 3.6e-28 | 162 | 260 | 1 | 83 |
EEEE-..-HHHHTT-EE--HHH.HTT.................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f+k+ltpsdv+k++rlv+pkk+a+++ gg+k e+++l + d + rsW+++++y+k+s+++v+t+GW++Fvk+++Lk++D+vvF RWR93352.1 162 FQKELTPSDVGKLNRLVIPKKHATKFfpplnegrgigeesssdGGSK-EEVQLEFFDNNMRSWKFRYCYWKSSQSFVFTRGWNRFVKDKQLKAKDVVVF 259 99********************************9999999965444.66899999******************************************* PP E CS B3 83 k 83 + RWR93352.1 260 Y 260 9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MSTTSNTVMT REGSASNSIT NPYQPNKRLR HKNPSTPVRF KGVVLQQNGH WGSQIYANHQ 60 RIWLGTFKSE QEAALAYDSA SIKLRSGDSH RNFPWTNLTI QEPSFQELFS IEAVLNMIKD 120 GSYESKFADY LRTRSAKATF DGLLDPNRGF VNQEGVLCQQ IFQKELTPSD VGKLNRLVIP 180 KKHATKFFPP LNEGRGIGEE SSSDGGSKEE VQLEFFDNNM RSWKFRYCYW KSSQSFVFTR 240 GWNRFVKDKQ LKAKDVVVFY ECRYREVSTV KKGFWMIDIA SDGSCENVKN CIDSIGGDVE 300 LQLCLGGLSG HGPDWKDNKV NEEKEEELPD MHKKRVKLFG IDINK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50680.1 | 5e-97 | RAV family protein |