PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93184.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 336aa    MW: 36986.9 Da    PI: 4.9417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.4e-14105156155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P+    + k+ + a+i   +v++Ik+Lq
  RWR93184.1 105 QRASHIMVERNRRKQMNENLSILRSLMPSF---YIKRADQASIIGGVVNFIKELQ 156
                 79***************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDRLSDLFE EREFGDTNLA GADSPENLFD IFEALEDAFD LPCTPVEEAG FSPNTEKMPP  60
LTSQKSSSSS AKHEAETDIE GPPANKKLKT SSTSSSEDAA PDGQQRASHI MVERNRRKQM  120
NENLSILRSL MPSFYIKRAD QASIIGGVVN FIKELQQVLR SLEEKKQRKV YSEVLSPRSV  180
SSPRPLPLSP RPPSLSPRPP PLSPIIGLPI SPRTPQPASP YNPRMQQLSL PSPKATFHEP  240
PSFDNVKELA ANSKSRVADV EVKFAGPNVL LKTTSPRIPG QALKIISTLE DLALEVLHVS  300
ISTVDETMLN SFTIKIGIEC ELSAEDLANE IQQTFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.18e-52bHLH family protein