PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93091.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 92aa    MW: 10215.5 Da    PI: 8.5247
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.42.2e-0720591554
                HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +i +  ++L++llP+ + + +  K s + +L+++++YIksL
  RWR93091.1 20 QIVDLVSKLQTLLPEiR-NHGTDKASASKVLQETCNYIKSL 59
                6667789********77.889999****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRQ SGSSRITDDQ IVDLVSKLQT LLPEIRNHGT DKASASKVLQ ETCNYIKSLH  60
REVDDLSERL AELLATTDTS SAQAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.11e-36bHLH family protein