PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92801.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 602aa    MW: 67037.5 Da    PI: 5.1473
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS462.82e-1412326022374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL+ecA a+++g+ e+a++l+++l++++s +gdp qR+aay++e+L ar+a s+++lykal+++e +   +s++l+a+++++ev+P++kf++++aN 
  RWR92801.1 232 KQLLFECAAAIAEGNVEEASTLITKLRQMVSIQGDPPQRIAAYMVEGLVARMAASGQGLYKALRCKEPP---TSDRLSAMQILFEVCPCFKFGFMAANG 327
                 589*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI ea++ eer+HiiDfdi+qG Q+ +L+qaL++Rp++pp+lRiTgv++pes+  s   l+ +g+rL+k+Ae++gvpfef++ +  +++d+++++L+++
  RWR92801.1 328 AIAEAFKDEERIHIIDFDINQGSQYFTLIQALSTRPSKPPHLRITGVDDPESVqrSVSGLRIIGQRLEKLAEAVGVPFEFRA-IPAKTADVTPSMLECR 425
                 ***************************************************9999999************************.6999************ PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 p+Ea++Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v++veq++++n+++F+ rf+ea +yysa+f+sl+a+lpres +ri+vEr++lgr+ivn
  RWR92801.1 426 PNEAVVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLEPKLVTIVEQDVNTNTAPFFPRFVEAYNYYSAVFESLDATLPRESPDRINVERHCLGRDIVN 524
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +vacega+r+er e ++kWr+r+++aGF + pls +++  +++ll+k + d y+v+ee g+l++gW+d+ L+++SaWr
  RWR92801.1 525 IVACEGADRIERYEVAGKWRARMTMAGFAACPLSAYVNGAIRSLLQKSYCDRYKVKEEGGALYFGWEDKILIVASAWR 602
                 *************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 602 aa     Download sequence    
MSLVRSADSS ATSYGEPNLY TLKSNSDVTR ISNQVSNSER KFKYGPESYF QEIYTQQYSN  60
SSSKEFPGEQ VGFLHPSNSA VAGSMFHPHG SISDQLMMAS SGSSTTMQNP YNSCSPLIRY  120
SHPSSFANTT HSSSPISEYL DRESPDHLMD YGEDEIRSKI QELERELLND NDNDLFDPDQ  180
GMTIDDEWVE PIKNLPIANS PKESSSSKSN GSSISSNKET PMRPMSTPRA PKQLLFECAA  240
AIAEGNVEEA STLITKLRQM VSIQGDPPQR IAAYMVEGLV ARMAASGQGL YKALRCKEPP  300
TSDRLSAMQI LFEVCPCFKF GFMAANGAIA EAFKDEERIH IIDFDINQGS QYFTLIQALS  360
TRPSKPPHLR ITGVDDPESV QRSVSGLRII GQRLEKLAEA VGVPFEFRAI PAKTADVTPS  420
MLECRPNEAV VVNFAFQLHH MPDESVSTVN QRDQLLRMVK SLEPKLVTIV EQDVNTNTAP  480
FFPRFVEAYN YYSAVFESLD ATLPRESPDR INVERHCLGR DIVNIVACEG ADRIERYEVA  540
GKWRARMTMA GFAACPLSAY VNGAIRSLLQ KSYCDRYKVK EEGGALYFGW EDKILIVASA  600
WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein