PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92783.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YB | ||||||||
Protein Properties | Length: 198aa MW: 22498.9 Da PI: 7.3235 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 175.9 | 3.9e-55 | 41 | 136 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 r+qdrflPianv+rimkk++P+n+k+skdaketvqecvsefisfvt+easdkcqrekrktingddl+wa++tlGf+dyv+plk+yl ky+elegek RWR92783.1 41 RDQDRFLPIANVGRIMKKAIPSNGKVSKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLIWAITTLGFDDYVNPLKLYLLKYKELEGEK 136 89*******************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEDESHVHGP IRGSPESSPH SDNNKNSNAK NIGNSSSSNN RDQDRFLPIA NVGRIMKKAI 60 PSNGKVSKDA KETVQECVSE FISFVTGEAS DKCQREKRKT INGDDLIWAI TTLGFDDYVN 120 PLKLYLLKYK ELEGEKLTIP KQHHQEQAPP TPQQQQQQHQ HHNMVQLDSS QHSLLYANQP 180 FSMPFSPQQQ QNDPRGRW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 2e-50 | NF-YB family protein |