PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92718.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 22725.1 Da PI: 5.3839 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 28 | 77 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +gr+v+eIr p g + r++lg+f +ae+Aa+a++aa+ l+g+ RWR92718.1 28 YRGVRRRS-WGRYVSEIRIP---GTKSRIWLGSFVSAEMAARAYDAAAFFLRGN 77 9****887.**********8...325*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MEESRSETFP RGRSDKRSPQ PDSPNFSYRG VRRRSWGRYV SEIRIPGTKS RIWLGSFVSA 60 EMAARAYDAA AFFLRGNSAN LNFPELASLL PRPNSASRRD IQRAAAKAAA TESLARHVSE 120 RDEAGTDFSV CTSGAFWELD EDIFRFFEDV KEAPLHTPHR IEADFGFDLG NYDCVLGNDN 180 AALDSWWDDG GCNGLTTWNR FV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16280.1 | 1e-23 | ERF family protein |