PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92561.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 283aa MW: 32102.9 Da PI: 8.0636

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	1e-35	12	104	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye++ed++ + +isw+e+g++fvv+ + +f+k++Lp+yFkh+nf+SFvRQLn+YgF+k+ +++ weF ++ F++g k+ll++i+ RWR92561.1 12 FLTKTYEMVEDPSSDVVISWNESGSTFVVWSPADFSKDLLPRYFKHNNFSSFVRQLNTYGFRKIASDR---------WEFGNDFFRRGAKDLLCDIR 99 9**************************************************************999.........****************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r++s+ RWR92561.1 100 RRRST 104 *9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MGSHSRSSPA PFLTKTYEMV EDPSSDVVIS WNESGSTFVV WSPADFSKDL LPRYFKHNNF 60 SSFVRQLNTY GFRKIASDRW EFGNDFFRRG AKDLLCDIRR RRSTPSSQAT AHKQNHGPPS 120 PDQSNSFEDQ RSSFTSSPKS SLKNHSSHET TATQFSNISD ENEKLRKDNH FLISELADAK 180 RQCEGLLVFL CNYLNVDREK INSIMLQGGG DLKAELYKEE VVGEEEDCMK LFGVWLKNKK 240 KRGCRDGEEG LVMGPLKERK MGFDAPWMKT CPSPGGESSK VCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	4e-69	HSF family protein