PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92539.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | B3 | ||||||||
Protein Properties | Length: 220aa MW: 25358 Da PI: 9.8433 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.6 | 8.1e-17 | 126 | 216 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+k ++ s+v+ +l lp +f++++ + ++ t+tl de+g +++ + +k++ l++GW++F a++L +gD +vF+l+++++f +v ++r+ RWR92539.1 126 FIKPMLISHVTGGFWLGLPVQFCKSYLPV--RDDTVTLVDEDGDEYQTVYLAQKTG----LSGGWRGFSLAHDLVDGDALVFQLVKNTTF--KVYIVRA 216 8999**********************634..6669***************444444....************************998888..8888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAVDEGSYED CRRKRLEENK KRMEELKLTQ LSQTLKNASP KPSPVKPGKP RTPRKEMIEV 60 EVRRSSRVAK RPAPDYKETV VYFERPRSYK RRDLLNRVYA SDKARFHAIE RANEVQSNLE 120 PEFPSFIKPM LISHVTGGFW LGLPVQFCKS YLPVRDDTVT LVDEDGDEYQ TVYLAQKTGL 180 SGGWRGFSLA HDLVDGDALV FQLVKNTTFK VYIVRANESK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 4e-74 | B3 family protein |