PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91747.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bHLH

Protein Properties

Length: 655aa MW: 73612.1 Da PI: 6.2464

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.6e-10	466	504	12	55
HHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 RRd++N++f Lr+++P + K++Ka+iL +++eY+k+L+ RWR91747.1 466 RRDKVNEKFLVLRSMVPIiN------KVDKASILSETIEYLKDLE 504 ****************77......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MEGVPEHHLK RRLAAAVRSI RWSYAIFWVI STRKQGMLVW GDGYYNGDIK TTKTVQSIEL 60 NDMDLQRSKQ LRELYKFLSA GNTIQQGKWS AALSPEDLTD TEWYYLVCMS FTFKHGQGMP 120 GRALANGHHI WLCNANYADS KVFTRSLLAK SASIKTVICF PLMGGVLEIG VTELISEDPS 180 LLQHIKTFFS ELPRPVCSEQ SNSSPRKADN NEDCACTVFD HGVVNGMPLD KVNSTAHSMK 240 LSEVGGHASP MRVNSYSSKE NIPSNINDEL KREPSGDSSN EFDQNHDMED SFMVDDLSST 300 SQTHYINDEF SDGLHGSVNS SNCTSESVLN PERVVISPSS WAQTSKLPLQ DLQECNHPKL 360 SLLDLETQDS HYAKILADVF QNSQRSAAKP YFRNDSCHSN FMAWREGWDT RQLQIITKQK 420 MLKKVLFDSP WMHGRYLLNQ GAVASKERVW KTEESGIGVN YALPERRDKV NEKFLVLRSM 480 VPIINKVDKA SILSETIEYL KDLEKRVEEL EACRESAESG ARERRKHPDI VERTSDNYGN 540 NETADGRKPS IHKRKASDVN ETDAELSWLL SKDSISDMTV TVVGKEVLIE LRCLWRECLL 600 LEIVEALSSL NLDALTLNSS TTDGFLTLTL TSKFRGAAVA SVGMIKDTLQ SIVGK

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MEGVPEHHLK RRLAAAVRSI RWSYAIFWVI STRKQGMLVW GDGYYNGDIK TTKTVQSIEL  60
NDMDLQRSKQ LRELYKFLSA GNTIQQGKWS AALSPEDLTD TEWYYLVCMS FTFKHGQGMP  120
GRALANGHHI WLCNANYADS KVFTRSLLAK SASIKTVICF PLMGGVLEIG VTELISEDPS  180
LLQHIKTFFS ELPRPVCSEQ SNSSPRKADN NEDCACTVFD HGVVNGMPLD KVNSTAHSMK  240
LSEVGGHASP MRVNSYSSKE NIPSNINDEL KREPSGDSSN EFDQNHDMED SFMVDDLSST  300
SQTHYINDEF SDGLHGSVNS SNCTSESVLN PERVVISPSS WAQTSKLPLQ DLQECNHPKL  360
SLLDLETQDS HYAKILADVF QNSQRSAAKP YFRNDSCHSN FMAWREGWDT RQLQIITKQK  420
MLKKVLFDSP WMHGRYLLNQ GAVASKERVW KTEESGIGVN YALPERRDKV NEKFLVLRSM  480
VPIINKVDKA SILSETIEYL KDLEKRVEEL EACRESAESG ARERRKHPDI VERTSDNYGN  540
NETADGRKPS IHKRKASDVN ETDAELSWLL SKDSISDMTV TVVGKEVLIE LRCLWRECLL  600
LEIVEALSSL NLDALTLNSS TTDGFLTLTL TSKFRGAAVA SVGMIKDTLQ SIVGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-128	bHLH family protein