PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91296.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

AP2

Protein Properties

Length: 321aa MW: 36325.4 Da PI: 8.1073

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.2	1.5e-11	36	92	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ + Aa a++ a++k++g RWR91296.1 36 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQSKKGRQGAYDDETAAAHAYDLAALKYWG 92 57*****************99998888888888*89***********98 PP
2	AP2	51.6	2.3e-16	135	186	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg+f t eeAa a++ a+ +++g RWR91296.1 135 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFATQEEAATAYDMAAIEYRG 186 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MAKISQQNHN SNNTVTTKVR RTRKSIPRDS PLQRSSIYRG VTRHRWTGRY EAHLWDKNCW 60 NESQSKKGRQ GAYDDETAAA HAYDLAALKY WGPETILNFP LETYNEELKD MEGQSREEYI 120 GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTFATQ EEAATAYDMA 180 AIEYRGLNAV TNFHLSRYIK WLHPKPQNPN PDPKPDPTPV FLHHQTGGDA SAPPPRPGGA 240 ASSALGLLLQ SSKFKEMLER TSADDYPSPL PPAAAQNVPD RRCSFPDDIQ TYFECHDVTE 300 GDDVMFGDLS SFVGPIFEMD D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	7e-99	AP2 family protein