PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 429aa MW: 48882.3 Da PI: 6.8401 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.7e-19 | 72 | 119 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl RWR90918.1 72 RGPWTPEEDQKLIDYIQKHGDGSWRTLPKNAGLSRCGKSCRLRWTNYL 119 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.1e-17 | 125 | 169 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia +++ gRt++++k++w+++ RWR90918.1 125 RGRFSFEEEETIIQLHSILGNK-WSAIATRLP-GRTDNEIKNYWNTH 169 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MFSLKSLHIP SRETFLPEKQ LFLLFLTFIL FFHLLGSFQS ETLYISLSLS NIERVFEIMG 60 RVPCCDKNGL KRGPWTPEED QKLIDYIQKH GDGSWRTLPK NAGLSRCGKS CRLRWTNYLR 120 PDIKRGRFSF EEEETIIQLH SILGNKWSAI ATRLPGRTDN EIKNYWNTHI RKRLLRMGID 180 PVTHSPRLDL LDISSILSSS LYNPAQLSLT KLLGMEPFFN SEALRLATSI LSSQHESQML 240 RPQVLQENQF SNSQVQHPLP SFQTQQLQTP IQDIPSCSTS NGQFLTGAHL MPIIKEQFPS 300 GFSDLSYQNT QSTLWKGNLM PSNLDQRFPT LENCDYYNSN QSSMNPLSEH LNYQPNSSNF 360 NFCSVLSTPA SSPVTLNMSS TYINSSTSPT PLNSSSTYLN NSTEDESDSY CSNLLKFEIP 420 QLPDVSEFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 3e-97 | MYB family protein |