PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB_related | ||||||||
Protein Properties | Length: 135aa MW: 15580.5 Da PI: 4.1432 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.9 | 8.3e-12 | 73 | 118 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+ Ed+l+ + +G + +W++Ia++++ g+t q+ ++++ RWR90546.1 73 EWTKAEDKLFETTLAIYGEDtpdQWEKIAKELP-GKTTQQVEEHYRL 118 7********************************.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MPSWWRALLL THSARDQRPA MGEHKIDSVL VVWNMVEDAI GAQYKGYYDG FDFVIPDLSS 60 SPFFDDPFFP VDEWTKAEDK LFETTLAIYG EDTPDQWEKI AKELPGKTTQ QVEEHYRLLV 120 KDVENIESVL DPVPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 6e-18 | MYB_related family protein |