PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR90468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25545 Da PI: 6.1511 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.6e-10 | 68 | 115 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RR+r+N++f eL ++l + + +K +Ka+iL A + + +L RWR90468.1 68 SKACREKMRRERLNDRFVELSSVLEPG---RPPKSDKAMILSDAARVLVQL 115 6789**********************8...89************9887666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MGTNPISDYD WIDEVGGTDG DLRWTLDGFG DLPNPCVDIG DPYKDFCVLE QGDARKRARD 60 ESVTAPKSKA CREKMRRERL NDRFVELSSV LEPGRPPKSD KAMILSDAAR VLVQLRSEAQ 120 QLKETNEKLQ ATIKDLKAEK NELRGEKIKL KEDKERLEQH MKAMTMPPPA YMPHLAPFHA 180 AAAAAFAAQG QAAVNKAAMY PGYPGVAMWQ WAPPADVDTS QDHKLQSPAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-58 | bHLH family protein |