PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 329aa MW: 36254.1 Da PI: 7.7924 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.6 | 4.4e-11 | 18 | 63 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 W+ eE + + av+ + + +W++Ia+ ++ gRt ++k+++q++ RWR90387.1 18 WSWEENKAFEVAVAIHAEDrsdRWERIAAAVP-GRTIAEIKHHYQSL 63 *****************99*************.************86 PP | |||||||
2 | Myb_DNA-binding | 41.8 | 2.5e-13 | 115 | 159 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r++ Rt+ q+ s+ qky RWR90387.1 115 AWTEDEHRLFLLGLSKYGKGDWRSISRKFVVSRTPAQVASHAQKY 159 6*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MKQQGQMTTN EKSKGTLWSW EENKAFEVAV AIHAEDRSDR WERIAAAVPG RTIAEIKHHY 60 QSLVEDIRAI EGGIDPLPPY LPRKCAAHTG RYQGISNHGG KGSSRSNQER RKGIAWTEDE 120 HRLFLLGLSK YGKGDWRSIS RKFVVSRTPA QVASHAQKYF IRLESNKRRR SSIHDITNVG 180 NEDISAHQES IIDQSNGHIG ATGESIKQSR QPPSSTSGGS TNSNKRWRSS IYDITGVGNG 240 EILVPQAPIT SQPNGPTGEH SSPPPSSTFE VYGPLTIGQP IGESLVSVTG TPVPAPPDMA 300 YDAYRWDHCS WCPNEHSSND ISNAHITED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 4e-73 | MYB family protein |