PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24612.5 Da PI: 5.2987 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.3 | 4e-18 | 33 | 82 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g RWR90127.1 33 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 82 7*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MVKNNKVGSL QANVLGEKEQ QNLHKSMASR KKQYKGVRMR SWGSWVSEIR APNQKTRIWL 60 GSYSTPEAAA RAYDAALLCL KGSSANLNFP ITPSTFIPTT LMSPKSIQRV AAAAANATTP 120 SSSTSPSPST PSTSPPSPPP SSPSSSSSSS SPPSSPLDYQ DELFTSSWAN YTACEVEEPV 180 NQWYDFGEAF SPKYMDEMIN ACTFLAPPPL LEEFDEEGDI HLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77640.1 | 2e-30 | ERF family protein |