PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23187.9 Da PI: 10.3715 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.7 | 1e-08 | 119 | 159 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L RWR90093.1 119 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 159 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MDMMMMMQMD KLPQLSQFPL NNAPPIFESL PVTTPALINP TSSPLPFICN TTQDPAMPVI 60 LRGASSSSSS ANKGSSVEAM REMIFRIAAM QPIHIDPESV KPPKRRNVKI SKDPQSVAAR 120 HRRERISEKI RILQRLVPGG TKMDTASMLD EAIHYVKFLK TQVQSLERAA ANTSNAFGLP 180 SAVSGIGYPS SLIGKHYHQS SEIFSPTQLL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 3e-48 | bHLH family protein |