PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR90071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27649.8 Da PI: 6.2563 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.6e-19 | 99 | 148 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ g+WvAeI+dp r +r++lg+f taeeAa+a+++ + +++g RWR90071.1 99 PKYRGVRQRS--GKWVAEIHDPE----RrRRVWLGTFNTAEEAARAYDEKAIEFRG 148 79****9865..*********62....34************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 249 aa Download sequence |
MRATFREEGE PSRVVLSSGL TREEENYIIL STYKHVLFND IVDHSSPNVQ TLPFQGSGDV 60 APSTQSDGSP ILLNVSEGPC SSCGLGIEKC LGCNLFSPPK YRGVRQRSGK WVAEIHDPER 120 RRRVWLGTFN TAEEAARAYD EKAIEFRGAR ARLNFPSFEF GPPPDHTLLE GQQEQQQPST 180 SHPTSLNWEA PPEATFEGNM VEALGGEEFR NWVKIGNDQY ALAALSSAST GEKHGDRIIK 240 KRTRKSSLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33710.1 | 1e-22 | ERF family protein |