PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89959.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 315aa    MW: 35254.8 Da    PI: 5.4566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13122173155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h  +Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  RWR89959.1 122 QRMTHIVVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIVGGAINFVKELE 173
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MALEAVVFPQ DLFGYSCKDF YSLPAAFTFD DLKVEEKEKK DLVLDTETSG LIEKNQNLAT  60
GFDSFYGNWD SSPSSILQNS SPEACTGDGF FNGSYPPEAT PCGRRKRRRA KSSKNIEEVE  120
NQRMTHIVVE RNRRKQMNEY LAVLRSLMPP SYVQRGDQAS IVGGAINFVK ELEQLLQSLE  180
AQKRMTQQSE PGLTSPFADF FTFPQYSSST NRSSTNEAVA ENHSAIADIE VTMVESHANL  240
KVFSKRRPKQ LLKIVAGLQN LHLTILHLNV TSIGEMVLYS FSVKVEENCG LTTVDEIATA  300
VYHMLGRIQE ESGIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105109RKRRR
2123134RMTHIVVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-77bHLH family protein