PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR89913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 327aa MW: 36949.2 Da PI: 6.7086 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.9 | 5.6e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W t ++ g++R++k+c++rw +yl RWR89913.1 14 KGPWTPEEDKKLVKYIQKHGHGSWITLPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.1 | 9.9e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE++++++++ +G++ W++Iar+++ gRt++++k++w++ RWR89913.1 67 RGKFSPEEEQIILNLHSIHGNK-WSRIARHLP-GRTDNEIKNFWNT 110 89********************.*********.***********98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 327 aa Download sequence |
MGRSPCCDEN GLRKGPWTPE EDKKLVKYIQ KHGHGSWITL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SPEEEQIILN LHSIHGNKWS RIARHLPGRT DNEIKNFWNT QLKKKLIEMD 120 IDPMTHCPRT DFLLTMAQLI PLANLKELMD REPWEKQAIR LQEVIQSAKF QYIQYLVQSA 180 MAMAGNSNNI ADIVAINLLS SMPSPRGTLL NPSQLENPTQ GSLELLDAQP LNDQIPHYTP 240 SPDLPYPWDF MPPMGNEINQ DSNFTQLSHG DYTPKSPLPP SLPPTLGERS IINPADACSS 300 SSCDGSTPPF WPDLFLDDPL FSQASSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G34670.1 | 3e-93 | MYB family protein |