PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 36293 Da PI: 6.5099 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.5 | 3.6e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv++++++G g+W++ ++ g++R++k+c++rw +yl RWR89912.1 14 KGPWTPEEDTKLVQYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.1e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++teE++ +++++ lG++ W++Ia++++ gRt++++k++w+++ RWR89912.1 67 RGKFSTEEEQTILNLHSILGNK-WSAIASHLP-GRTDNEIKNFWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGRSPCCDEN GMKKGPWTPE EDTKLVQYIQ KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF STEEEQTILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HIKKKLIHMG 120 IDPNTHRPRT DFFTTLPELM VIANLKEVMM DNQPWAEHAV RLQEAVQLAK YQYIQYLIQS 180 AVSVASNPDS SSNSTADMDA INVMSSLPLL RENLGLNPSQ IENATQYSLG VDGGRPLNDK 240 LPYTTPPDLE FQALMRNEIN QDSDLASLSQ GEFTPRSPLP PSPPFTIGER SMKNPADACC 300 TSSYDGSSPS FWAELLLDDP FYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 5e-98 | MYB family protein |