PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 253aa MW: 27529.6 Da PI: 5.1502 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.7 | 3e-18 | 69 | 118 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g RWR89780.1 69 TYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALTIKG 118 69****998.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEASSNKECA SNKCSSSSSS SSSSSDSDRS DKISIQGSSM AMANANANAK ANEMGKKRPV 60 SGNDGRHPTY RGVRMRNWGK WVSEIREPRK KSRIWLGTFA TPEMAARAHD VAALTIKGQA 120 AYLNFPEMAP QLPRPASSSP KDIQAAAAKA ANLVLGEPRS LQPLDQNQPV DLPLISQESS 180 SSPSPSPSPS ITAKADDDDR MLFDLPDLLH DLQCNLTTPT DEFYYCSLSW IAAGADAGIQ 240 LEEPFLWEER DYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-45 | ERF family protein |