PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR89634.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 368aa MW: 40172.6 Da PI: 7.1004

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR89634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.8	3.8e-18	53	113	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p +ee++++ ++l ++ +++V++WFqNr+ + k+ RWR89634.1 53 KPRWNPKPEQIRILEAIFNSgMVNPPREEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 113 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.2	2.8e-36	52	115	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P++eei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq RWR89634.1 52 PKPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 115 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MASSNRHWPS MFKSKPCNTH HQWQHDINSS LTSNSYQRTP YTSGCEERSP EPKPRWNPKP 60 EQIRILEAIF NSGMVNPPRE EIRKIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKQRHLQT 120 AKSQPYPVSS SSSSSEKSSP AAAEKALALG SGRNVIEVAS NSPTGSVTET YFQTNGDFSQ 180 EPFSFQVQAG GAGTLSSQGY CFAELSNMVQ LPEPGIGPCP LLLGDLVSQE ASKKEVGEKM 240 KMQEQELHYV TATSASSTAT SRTAATTSSL SEMQGAGKTC GDGLTGPPRS TVFINDMAFE 300 VAAGPISVRE AFGEEAVLLH SSGQPVLTNE WGVTMHPLQH GAFYYLSGLG FPGISSDFYK 360 GYDTPQSH

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MASSNRHWPS MFKSKPCNTH HQWQHDINSS LTSNSYQRTP YTSGCEERSP EPKPRWNPKP  60
EQIRILEAIF NSGMVNPPRE EIRKIRAQLQ EYGQVGDANV FYWFQNRKSR SKHKQRHLQT  120
AKSQPYPVSS SSSSSEKSSP AAAEKALALG SGRNVIEVAS NSPTGSVTET YFQTNGDFSQ  180
EPFSFQVQAG GAGTLSSQGY CFAELSNMVQ LPEPGIGPCP LLLGDLVSQE ASKKEVGEKM  240
KMQEQELHYV TATSASSTAT SRTAATTSSL SEMQGAGKTC GDGLTGPPRS TVFINDMAFE  300
VAAGPISVRE AFGEEAVLLH SSGQPVLTNE WGVTMHPLQH GAFYYLSGLG FPGISSDFYK  360
GYDTPQSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	7e-65	WOX family protein