PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89458.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 277aa    MW: 30889.9 Da    PI: 8.4281
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.48e-143680147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       RWR89458.1 36 RESWTEQEHDRFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 80
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MALPGLGSLA TTADVPSSEE DPNKKIRKPY TITKSRESWT EQEHDRFLEA LQLFDRDWKK  60
IEAFVGSKTV IQIRSHAQKY FLKVQKNGTS EHVPPPRPKR KAAHPYPQKA SKNDPLPSQA  120
TPHFQSSSCL LELGYGYRMG SKTMLRNSAP NAAMSSWAYS SAPPVNVLHP TKGVSPDFAQ  180
VYSFIGSVFD PNTSGHLEKL KEMDPINVET VVLLMRNLSV NLSSPDFEEH RRLLATYDTA  240
SEEAKPSDAD NRIDIDDSDK ALSRPKVDHH ALIPAVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-87MYB_related family protein