PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89364.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 676aa    MW: 75784.4 Da    PI: 6.7904
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS428.84.4e-1312826481373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+lL++c+ea++s++l+ ++++L+rl e+asp+g p++R+aayfteALa r a+ +++++++ pp+e +   +++++++++l++++sPi+kf h+t N
  RWR89364.1 282 LVSLLVACVEAIESRNLATINQFLSRLGEIASPEGAPIHRVAAYFTEALAIRTAKLWPSVFQIAPPRELD-LAEDDVATSFRLLNHLSPIPKFLHFTSN 379
                 689****************************************************************997.6789999999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 +++l+a+eg++rvHiiDfdi+qGlQWp L+q+LasR ++p ++RiTg+g+    s++el+ tg+rLa fA+++++pfef++ v++rled++l++L+vk+
  RWR89364.1 380 EMVLRAFEGKDRVHIIDFDIKQGLQWPGLFQSLASRHNPPTHVRITGIGE----SNQELQDTGDRLAGFASAFNLPFEFHA-VVDRLEDVRLWMLHVKE 473
                 **************************************************....9**************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E++aVn+++qlh++l ++   +   +++L l++s++P++v ++eqea+hn++++ +rfl++leyysa+fds+ ++lp ++ +rikvE++ ++rei+n+
  RWR89364.1 474 HESVAVNCIFQLHKVLYDESGGA--LRNLLGLIRSTNPTIVLMAEQEAEHNHPRWTRRFLNSLEYYSAIFDSIGSSLPLDNPARIKVEEM-FAREIRNI 569
                 **************996554433..478**************************************************************.******** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 +ace ++r+erhe++ +Wr+ +ee GF+ v ++e+++ q ++ll++++s+ y+v    e+ g l+l W d+pL++vS+W
  RWR89364.1 570 LACERSDRVERHEKFDTWRRLMEEGGFRCVGVGERETLQSRMLLKMFSSENYSVMqqgEDGGGLTLSWLDQPLYTVSSW 648
                 ************************************************999*99967777999**************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MLAGCPALLS PRHRLRSEAS VQLQACHLQL QEKLGSMSTQ RLDLPCSFNR KEAAPRSQSS  60
RPVSISVEKP IDAKSSTCSI RNNVRIPSPI STQTAFWEGK REIEEGFWEK KRKSLKRFSE  120
QSSSEESCVN RAKRKRSCSG NANSPLELGG GDFWLPPTVE DPRIMLGITS LPPRVPFPTS  180
SSAEEERVCF VPRERNNNPW VKSVVTEITD KGDKGVYTSE GSKKAKSSSS SASSESHSFG  240
PRLNEESSAI EEGNGSHIRY TTDGVGTTGN ESTQERNYGL ELVSLLVACV EAIESRNLAT  300
INQFLSRLGE IASPEGAPIH RVAAYFTEAL AIRTAKLWPS VFQIAPPREL DLAEDDVATS  360
FRLLNHLSPI PKFLHFTSNE MVLRAFEGKD RVHIIDFDIK QGLQWPGLFQ SLASRHNPPT  420
HVRITGIGES NQELQDTGDR LAGFASAFNL PFEFHAVVDR LEDVRLWMLH VKEHESVAVN  480
CIFQLHKVLY DESGGALRNL LGLIRSTNPT IVLMAEQEAE HNHPRWTRRF LNSLEYYSAI  540
FDSIGSSLPL DNPARIKVEE MFAREIRNIL ACERSDRVER HEKFDTWRRL MEEGGFRCVG  600
VGERETLQSR MLLKMFSSEN YSVMQQGEDG GGLTLSWLDQ PLYTVSSWAP VDLAGSSSSF  660
SQPTTRFLHY SFLCYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein