PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89363.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 685aa    MW: 76477.2 Da    PI: 6.1175
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS428.36.2e-1313026681373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+lL++c+ea++s++l+++++ L+rl e+asp+g p++R+aayfteALa r a+ +++++++ pp+e +   +++++++++lf+++sPi+kf h+t N
  RWR89363.1 302 LVSLLVSCVEAIESKNLAAINQSLSRLGEIASPEGAPIHRVAAYFTEALAIRTAKLWPSVFQIAPPRELD-LAEDDVATSFRLFNHLSPIPKFLHFTSN 399
                 689****************************************************************997.678999999******************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 +++l+a+eg++rvHiiDfdi+qGlQWp L+q LasR+++p ++RiTg+g+    sk+el+ tg+rLa fA+++++pfef++ v++rled++l++L+vk+
  RWR89363.1 400 EMVLRAFEGKDRVHIIDFDIKQGLQWPGLFQCLASRTNPPTHVRITGIGE----SKQELQDTGDRLAGFASAFNLPFEFHA-VVDRLEDVRLWMLHVKE 493
                 **************************************************....***************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E++aVn+++qlh++l ++   +   +++L l++s++P++v ++eqea+hn++++ +rfl++leyysa+fds+++++p +  +rikvE++ ++rei+n+
  RWR89363.1 494 HESVAVNCIFQLHKVLYDESGGA--LRNLLGLIRSTNPTIVLMAEQEAEHNHPRWTRRFLKSLEYYSAIFDSIDSSVPLDYPARIKVEEM-FAREIRNI 589
                 **************996554433..478**************************************************************.******** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 +ace ++r+erhe++ +Wr+ +ee GF+ v ++e+++ q ++ll++++s+ y+v    e+ g l+l W d+pL++vS+W
  RWR89363.1 590 LACERSDRVERHEKFDTWRRLMEEGGFRCVGVGERETLQSRMLLKMFSSENYSVMqqgEDGGGLTLSWLDQPLYTVSSW 668
                 ************************************************999*99967777999**************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    
MLAGCPALLS PRHRLRSEAS VQLQACHFQL QDKLGSMSTQ RLDLPCSFNR KEAAPRSQSS  60
RPVGLSVEKP LDAKSSTYSI RRNVRIPSPI STQTAFWDGK REIEECFWEK KRKSLKRFSE  120
QSSSEESCVN RAKRKRSCSG NDFFKPDNSL DAERLGFGQL GSGSIWSPLT VEDPCIMLGI  180
TSLSQAPSPA SSSAEEEERV CFIPREDIFP PIPFINNNPW VESVVTEITD KGDEGVYTSE  240
GPKKAKSSSS STSSESHSFG PRLNVESSAI EVGNGSHIRY TADGDRTTGN GSTQEGNYGL  300
ELVSLLVSCV EAIESKNLAA INQSLSRLGE IASPEGAPIH RVAAYFTEAL AIRTAKLWPS  360
VFQIAPPREL DLAEDDVATS FRLFNHLSPI PKFLHFTSNE MVLRAFEGKD RVHIIDFDIK  420
QGLQWPGLFQ CLASRTNPPT HVRITGIGES KQELQDTGDR LAGFASAFNL PFEFHAVVDR  480
LEDVRLWMLH VKEHESVAVN CIFQLHKVLY DESGGALRNL LGLIRSTNPT IVLMAEQEAE  540
HNHPRWTRRF LKSLEYYSAI FDSIDSSVPL DYPARIKVEE MFAREIRNIL ACERSDRVER  600
HEKFDTWRRL MEEGGFRCVG VGERETLQSR MLLKMFSSEN YSVMQQGEDG GGLTLSWLDQ  660
PLYTVSSWAP IDLAGSSSSL SQPTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.11e-180GRAS family protein