PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89355.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 265aa    MW: 28927.2 Da    PI: 8.8567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-192373256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+f+++eeAa+a+++a+++l+ge
  RWR89355.1 23 RFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTFDSPEEAARAYDEAARALRGE 73
                589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MVGATATTAN TKPAPTTRPT ARRFVGVRQR PSGRWVAEIK DSSQRVRLWL GTFDSPEEAA  60
RAYDEAARAL RGENARTNFA LAPAISSPSD SDGAFPSPER GVNFASLKAK LSKNLQGIIT  120
RTRDNKASKT RVSDHFTFAS IFRPRSFNYQ SGVDLKSIEK SVQPSFIVPR AAEEPSWDSS  180
CASDSGNTES CEQHTVFRRL GFDSDGSDVG DVGLSGRFED EIMGWIDDKE LMVGEIESTK  240
NKKCKVSSSV IVPPSFSLSE FFGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-16ERF family protein