PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR89349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28211.2 Da PI: 6.1654 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.7 | 2.2e-16 | 103 | 151 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+ ++++g+Wv+eIr+p+ + r++lg+f tae+Aa+a++ a+++l+g RWR89349.1 103 IYRGI--RPRSGKWVSEIREPR----KaSRIWLGTFPTAEMAAAAYDVAALALKG 151 69***..699**********94....36***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVRMHLPPPL TLLGSLFISI SFGLLVIRPL HCLLFPFYKC ILMDMDMDED DGEPTSRVHL 60 LHQLPAAPPA NVRHSDQSLR PFPTHKKLER AATTSTRSGK HPIYRGIRPR SGKWVSEIRE 120 PRKASRIWLG TFPTAEMAAA AYDVAALALK GGDAVLNFPG SVSSNPIPAS TSPSEIRAAS 180 VAAAAARLPK KGGDETVSAE SSVQLAGEGD EFVDEEALFA MPKLLENMAE GMLLSPPRLN 240 SPESDDSPDN SDGESLWSYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-39 | ERF family protein |