PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR88690.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 219aa    MW: 24619.6 Da    PI: 6.8819
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR88690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.25.6e-1554103255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr++   g+Wv+e+r+p++   + r++lg+f  +e+Aa a++ a+++++g
  RWR88690.1  54 IYRGVRQRN-GGKWVCEVREPYK---KSRIWLGTFSCPEMAAWAHDVAALAMRG 103
                 69****999.9*********765...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MDLGQEYSTI SSSSNNQSPS QVSSNGSTSS HVQSPSQPKR RAGRKKFRET RHPIYRGVRQ  60
RNGGKWVCEV REPYKKSRIW LGTFSCPEMA AWAHDVAALA MRGRAATLNF PDSAWLLPQA  120
ESSLPKDIQR AAAKVADVFR NIKSSSIIEM SKFTSSNRIS EHEPETEHHV FLDDEELFNM  180
PGLLANMAEG LLIPPPGMQN EFNWDEVGCH MDLSLWSEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-65ERF family protein