PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87425.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 335aa    MW: 37056.2 Da    PI: 10.2212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19139189255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r +lg+f tae+Aa a+++a+ +++g
  RWR87425.1 139 HYRGVRRRP-WGKFAAEIRDPAKNG--ARLWLGTFETAEDAAIAYDQAAFRMRG 189
                 8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSGQGTGSDL DMLEFLRHHL LEDLELPATS PDGPPASYCR TSSFSSSHFP CQTESRGDLP  60
SNVEGSDDMV LYGFINDAIS AGWIPSLATM KKAGFPPLQH VAVESDPIDI TPAPKADPTR  120
ATAAPRQEKQ APAEEKGKHY RGVRRRPWGK FAAEIRDPAK NGARLWLGTF ETAEDAAIAY  180
DQAAFRMRGS RALLNFPLRV ATSSVTPAPG SKRPSPEPTS LSESSSLKRP RRGRQAAASQ  240
AELDYSRSEV RPVQHPVTVP LGEQLLVLRR RSYLPRLLRA VRKLRQNEAP AADMKLPLLK  300
SRPHLLGDDY KTRAPPTLKK ERWQSTFIII FLYSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-46ERF family protein