PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87296.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 421aa MW: 45079.8 Da PI: 7.008

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.8	1.8e-21	312	374	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++ L++eN+aL+ e++++k+e+++l +e+ RWR87296.1 312 ERELKRQKRKQSNRESARRSRLRKQAECEELAQRLGILKEENTALIAEVNRIKEECERLVAEN 374 89********************************************************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MGSTEMDTSE KGSKASEKEQ TPTTSSSAAY PDWAGFQAYS PIPPPGFFHS PVASSPQAHP 60 YMWGAQQFMP PYGTPPHPYV AMYPHGGLYP HPSIPPGSLP FSPYAMPSPN GHAEASGAML 120 GGVDTDGKSP EGKDRSPLKR SKGSLGSLNM LIGKNNNDDL GKTSGASTNG FVSQRKPEIY 180 SGESASEGSS EGSDTNSQNE SQQKKPCGQD SEEAEASQYR SSANNHQNGV AHPPHAILNQ 240 TMPIMPMPAH GAPAGVTGPA TNLNIGMDYW GGPTAMPIPV LRGKVPATPA GGAVVPTGLV 300 GPRESELWPQ DERELKRQKR KQSNRESARR SRLRKQAECE ELAQRLGILK EENTALIAEV 360 NRIKEECERL VAENTALKDR LGKIPRGHED SRSDRNGQPS GNNDHQRHLE SGTQAGQKEP 420 A

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MGSTEMDTSE KGSKASEKEQ TPTTSSSAAY PDWAGFQAYS PIPPPGFFHS PVASSPQAHP  60
YMWGAQQFMP PYGTPPHPYV AMYPHGGLYP HPSIPPGSLP FSPYAMPSPN GHAEASGAML  120
GGVDTDGKSP EGKDRSPLKR SKGSLGSLNM LIGKNNNDDL GKTSGASTNG FVSQRKPEIY  180
SGESASEGSS EGSDTNSQNE SQQKKPCGQD SEEAEASQYR SSANNHQNGV AHPPHAILNQ  240
TMPIMPMPAH GAPAGVTGPA TNLNIGMDYW GGPTAMPIPV LRGKVPATPA GGAVVPTGLV  300
GPRESELWPQ DERELKRQKR KQSNRESARR SRLRKQAECE ELAQRLGILK EENTALIAEV  360
NRIKEECERL VAENTALKDR LGKIPRGHED SRSDRNGQPS GNNDHQRHLE SGTQAGQKEP  420
A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	335	RRSRLRK
2	329	336	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-134	bZIP family protein