PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87266.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 859aa MW: 99147.8 Da PI: 7.6141

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	92.5	5.4e-29	181	270	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYneYA+++GF r+s++ +sk++++++ r+fvCs+eg+r++++ + ++ +++r+ tr+gC a+++vkk++ gkw vt++++eHnH+l RWR87266.1 181 FYNEYARRIGFGSRISNNLRSKKDRRTIARKFVCSREGFRAKKHLDnLNRVKKPRMITRIGCGAMMMVKKTELGKWIVTRFVKEHNHPLL 270 9*************************************9998875788899*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 859 aa Download sequence
MLNLLDDQAF NISKSFYLDP GHGPRITVHI QHSAGQDRVW VGVARPTITP LQLFPRKPIP 60 RASFLRFAVS ELGFLHSRVS LCDLSSSSSW GRNWKSKELL GASYHILKKI DAIMENSINP 120 ENPFWDFHMR SQDNGTECHM TPVSEPRAGG DRLMVEGFEG EQDVEPYEGL EFESEDAARI 180 FYNEYARRIG FGSRISNNLR SKKDRRTIAR KFVCSREGFR AKKHLDNLNR VKKPRMITRI 240 GCGAMMMVKK TELGKWIVTR FVKEHNHPLL SPNEVILLRS HRPSDTPKGR VRASDGAILD 300 MYGAEASGIS NLGFIEQDGG SNIVPGMKRK RNLGRDIEHV LDYFKRMQSE NPAFFYAIQV 360 DDDRSLCSMF WVDARSRMAC NYFGDGVYFD VMYRMNRYEM SFAQFTGLNH HLQSTLFGCA 420 LLLDETESSF IWLFKTWCEA MCGHHPLSII TDEDTAIEAA IMHVFPKTHH VLNKWHILNR 480 APKQLSHVYI PYPTFQGELE KCINLTETVE EFESNWELLL DRYELRENEW LRSLYITRKK 540 WVPVYLRGTF FAQLPTSLQS EVSNSIFDGY VNASSTLQEF VTQYERALDT WYEKEREEDV 600 QTMHDKPELK TRLPIEKHAS DVYTRKVFQK LQEEIFEMLG YAVNKVKEEG TNTMYKVGKY 660 DDQRRMHTVT FNLSETRAYC SCQMFEFSGI LCRHILKVFT ISNIRILPSH YILDRWTRNA 720 KSRVVLDERG TAMRANFRES VTLRYNNLCK QAIKCVEEGA TSGESYDVAL HALRAAWEKV 780 VASKERLARV AQPITPVSCS SRGDIISMQT EAARVTELET QTLVSGSSQG DIINTHCDAD 840 DTANHINLSD PRQWHSWLF

Sequence ? help Back to Top

Protein Sequence Length: 859 aa Download sequence

MLNLLDDQAF NISKSFYLDP GHGPRITVHI QHSAGQDRVW VGVARPTITP LQLFPRKPIP  60
RASFLRFAVS ELGFLHSRVS LCDLSSSSSW GRNWKSKELL GASYHILKKI DAIMENSINP  120
ENPFWDFHMR SQDNGTECHM TPVSEPRAGG DRLMVEGFEG EQDVEPYEGL EFESEDAARI  180
FYNEYARRIG FGSRISNNLR SKKDRRTIAR KFVCSREGFR AKKHLDNLNR VKKPRMITRI  240
GCGAMMMVKK TELGKWIVTR FVKEHNHPLL SPNEVILLRS HRPSDTPKGR VRASDGAILD  300
MYGAEASGIS NLGFIEQDGG SNIVPGMKRK RNLGRDIEHV LDYFKRMQSE NPAFFYAIQV  360
DDDRSLCSMF WVDARSRMAC NYFGDGVYFD VMYRMNRYEM SFAQFTGLNH HLQSTLFGCA  420
LLLDETESSF IWLFKTWCEA MCGHHPLSII TDEDTAIEAA IMHVFPKTHH VLNKWHILNR  480
APKQLSHVYI PYPTFQGELE KCINLTETVE EFESNWELLL DRYELRENEW LRSLYITRKK  540
WVPVYLRGTF FAQLPTSLQS EVSNSIFDGY VNASSTLQEF VTQYERALDT WYEKEREEDV  600
QTMHDKPELK TRLPIEKHAS DVYTRKVFQK LQEEIFEMLG YAVNKVKEEG TNTMYKVGKY  660
DDQRRMHTVT FNLSETRAYC SCQMFEFSGI LCRHILKVFT ISNIRILPSH YILDRWTRNA  720
KSRVVLDERG TAMRANFRES VTLRYNNLCK QAIKCVEEGA TSGESYDVAL HALRAAWEKV  780
VASKERLARV AQPITPVSCS SRGDIISMQT EAARVTELET QTLVSGSSQG DIINTHCDAD  840
DTANHINLSD PRQWHSWLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein