PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR87265.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GRF

Protein Properties

Length: 375aa MW: 42326.9 Da PI: 8.1462

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR87265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.9	1e-24	110	154	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ RWR87265.1 110 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVET 154 79****************************************986 PP
2	QLQ	65.2	1.6e-22	49	84	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l++Ky++a++PvP++Ll +i+k RWR87265.1 49 PFTASQWQELEHQALIFKYMMAGMPVPQDLLIPIRK 84 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MRIVSFSCLG AFALDWGSSE EIDRDREKES LGGRRREGGR EMNSAARPPF TASQWQELEH 60 QALIFKYMMA GMPVPQDLLI PIRKSFESMS ARFYHHPTMG YCSFYGKKPD PEPGRCRRTD 120 GKKWRCSKDA YPDSKYCERH MHRGRNRSRK PVETHTISQS SSTVTSLTPA GSSSEGSSFQ 180 NLPLHSMSNP QGPCSGNNPQ LQMDSGSYGM ANKEYRYLHG LRGDVDEHSF FSEASGSARG 240 VGMDFPVDNT WRLMPSRVSS FPQSKPILES NYSQFQAMQD FGHVAIPSAL SKQHQQQQQQ 300 QGLFRNEFGS PETVKQEGQS LRPFFDEWPK TRGSWSDLEE ERSNRTSFST TQLSISIPMS 360 SSDFSGTSSR SPNDD

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MRIVSFSCLG AFALDWGSSE EIDRDREKES LGGRRREGGR EMNSAARPPF TASQWQELEH  60
QALIFKYMMA GMPVPQDLLI PIRKSFESMS ARFYHHPTMG YCSFYGKKPD PEPGRCRRTD  120
GKKWRCSKDA YPDSKYCERH MHRGRNRSRK PVETHTISQS SSTVTSLTPA GSSSEGSSFQ  180
NLPLHSMSNP QGPCSGNNPQ LQMDSGSYGM ANKEYRYLHG LRGDVDEHSF FSEASGSARG  240
VGMDFPVDNT WRLMPSRVSS FPQSKPILES NYSQFQAMQD FGHVAIPSAL SKQHQQQQQQ  300
QGLFRNEFGS PETVKQEGQS LRPFFDEWPK TRGSWSDLEE ERSNRTSFST TQLSISIPMS  360
SSDFSGTSSR SPNDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-47	GRF family protein