PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR87125.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 26575.9 Da PI: 10.2778 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.3 | 6e-11 | 112 | 152 | 3 | 50 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 +GV++ k+ +W A I++ +k+++lg+ g+ eeAa ++++a+ RWR87125.1 112 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRAA 152 69**98..47*********4.....5********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MVSIRRRRLL GLCSGRSSFL VPLPRASENG SVSENHIQNA RWPKPFSVHP MPSKDFSQQK 60 QINISEACLG STNPSSSSLL KEEQKQQFSG QEAKHRRRRR RKHFEDQEPC AMRGVYFKNM 120 KWQAAIKVDK KQIHLGTVGS QEEAAHLYDR AAFLCGREPN FELPEEEKQE LLQFKWDEFL 180 TMTRNAITSK KHQRRVGAGT RKKPGTVLQS SDSGGDRAVS DYSASGEAEA DASNS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 101 | RRRRRR |
2 | 96 | 102 | RRRRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 2e-35 | ERF family protein |