PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR87027.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 290aa    MW: 31711.4 Da    PI: 9.9272
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR87027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-1491135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ ++++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       RWR87027.1  91 PWTEEEHKLFLLGIQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 135
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MQMARNCSQC GNNGHNSRTC EASDGGFMLF GVRVTQGPAP APAHFQKSAS MNNLSQFDHP  60
PPHADVASGY ASDDVVHAAS ARNRERKRGV PWTEEEHKLF LLGIQKVGKG DWRGISRNFV  120
KTRTPTQVAS HAQKYFLRRS NLHRRRRRSS LFDITTETFM GLQVEEENTM ENTNNTPVTA  180
FQATLAPTME NLTLQQHPNS PAAPKILRPT PLLPTPPAAT QTPRTLNLNL NSDSAMEDKI  240
ETPGLSLELS SSPPTSSNHL SPSRHSAFQA TSSFKSGDLD SKGGSIITVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.25e-67MYB_related family protein