PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR86908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 26408.9 Da PI: 4.7098 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.4e-18 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y GVr+++ +gr+++eIrdp + + r++lg+f+taeeAa a+++a+++++g RWR86908.1 37 RYLGVRRRP-WGRYASEIRDPAT---KERHWLGTFDTAEEAALAYDRAARSIRG 86 588******.**********843...4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MDFSNPPTNP SSSSSSSSTP PSDKKTRKKS SQDTPGRYLG VRRRPWGRYA SEIRDPATKE 60 RHWLGTFDTA EEAALAYDRA ARSIRGPRAR TNFAYHDMPP GSSLTSILSP DYYTATNTNL 120 LIPTSATAAS GGGQWIPTPP QEPVFTGVPS GPHLSDDTGL PPFPPAISDV SGCFGSGLSD 180 PVAQLSQAGS SNGQDLFGFP EQGSGYEAGF GIGVDEYLHS PLFGQMPSVS DSVTDVTDGF 240 DLGPSSYFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13910.1 | 2e-33 | ERF family protein |