PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR86720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MYB_related | ||||||||
Protein Properties | Length: 309aa MW: 34725.2 Da PI: 10.2804 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.1 | 5.5e-15 | 97 | 141 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++ ++ + k+lG+g+Wk I+r + +Rt+ q+ s+ qky RWR86720.1 97 PWTKEEHKTFLAGLKRLGKGDWKGISRNFVRTRTPTQVASHAQKY 141 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MAMKMRRKVC ISSDDDIEKR RECNRKGLKL FGVRILGQGE KEGEEEEGMR KSYSMGNFGT 60 YMDLEQTTGE QGYLSDGHLQ SKSSRRGRSN MRKKGVPWTK EEHKTFLAGL KRLGKGDWKG 120 ISRNFVRTRT PTQVASHAQK YFLRQTTPSE KKRRPSLFDV VMNDNVETSK TAPTFSMMAR 180 TIQTSGETPA GNKTQAAAQS LEATPTLSSI TCGQASNFHG FSDKEEISKD ITDQPFFRCS 240 EVLRTNSLIP TLHSCSRTHL IPPKIYNDYV PRVHGLLQQS FGPLPQSRPP AVGPSDDRHQ 300 QSGAHHFPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 3e-40 | MYB_related family protein |