PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86627.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 192aa    MW: 20699.9 Da    PI: 4.6291
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.9e-162473155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + y+G+r ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++l+g
  RWR86627.1 24 PVYHGIR-CR-SGKWVSEIREPRK---SSRIWLGTFATAEMAAAAHDVAALALKG 73
                679***9.55.6*********854...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MHENTSLHNS RPKQAAATSA GKQPVYHGIR CRSGKWVSEI REPRKSSRIW LGTFATAEMA  60
AAAHDVAALA LKGADAILNF PDSVHSNPVP ASNSPSDIRA AAAAAAALRE ARCGEADEAP  120
AIGRPENDDG ERSHLPMGYF REEFLDEEEL YAMPELLVSM AEGMLLSPPR LSSPESDDWP  180
EDSDGGNLWS YG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-27ERF family protein