PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86553.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 211aa    MW: 22667.4 Da    PI: 9.5995
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.94.2e-3166150187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+laL+++r+em+  +r++ lk+plWe+vs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s  +++f+qlea
  RWR86553.1  66 RWPRQETLALLKIRSEMDAIFRDATLKGPLWEDVSRKLAELGYSRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YKFFSQLEA 150
                 8*********************************************************************866665..*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MQQGGSGSGY GVSAERTSSF IGTHVEAASP ISSRPPAQGN FYELGLVGGS FGDEGEEVER  60
GVSGNRWPRQ ETLALLKIRS EMDAIFRDAT LKGPLWEDVS RKLAELGYSR SAKKCKEKFE  120
NVHKYYKRTK EGRAGRQDGK SYKFFSQLEA LHSSSNPPVA TTTATANPSL PSPAMAVSNP  180
VVVISSGGIL PLPTPTPAAP TTQINIQPNW V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-51Trihelix family protein