PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR86540.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 737aa MW: 80797.7 Da PI: 4.4579 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169 | 1.6e-52 | 9 | 138 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 lp GfrF+Ptdeelv++yLk+k++g++ ++ evi+evd++k+ePwdLp k +++++ ew+fFs+rd+ky++g+r+nrat++gyWkatgkd+ +++k RWR86540.1 9 LPLGFRFRPTDEELVNHYLKRKINGRRPDF-EVIREVDVCKCEPWDLPgKsVIQTNDPEWFFFSPRDRKYPNGQRSNRATEAGYWKATGKDRVIKAKss 106 699************************999.99***************6446777888************************************99976 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ ++g+kktLvfy+grap+g++t Wvmheyr RWR86540.1 107 GSIVIGTKKTLVFYRGRAPSGVRTCWVMHEYR 138 7778***************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 737 aa Download sequence |
MAVLSFESLP LGFRFRPTDE ELVNHYLKRK INGRRPDFEV IREVDVCKCE PWDLPGKSVI 60 QTNDPEWFFF SPRDRKYPNG QRSNRATEAG YWKATGKDRV IKAKSSGSIV IGTKKTLVFY 120 RGRAPSGVRT CWVMHEYRPT EDEVNGDNVG IVKIFLVLDA TNLVNFNWGG FVLCRLFRKH 180 EEIVNSPNYD EVDPSGLSPT TSKFSPSPSK SSPDDTNHVR NADQFDTVPD QVTSDLDMQG 240 APQPSTMVIE KKPTNIKRWL ADSNMVSDIE DRQAEVVPGK VDPMIGELGM FDEPFFHQPD 300 SLDYLRDFNM DFLFDNGFEN DQLLGTSQGG QVEQDASSVQ LTQFLDTVLN DNDEYLSEVS 360 SGQRAALEMG RGEPQHEMEH SFCSQGADTL DSVTAIPSMS SSDADAEMTA PLPLQVDKRL 420 DGSVFSGPES FSSNLQYGSG PVCLVDGGAG WNVSPDHFTA EPLYFVPNSF EEPADQESLG 480 TNIDDGTGIK ITECQPGYLA SAMGVSPGLG GSTDNGAGII IRDSQPLPIG VSKGSFSSLY 540 ESSDGGTGIK IRDRQSHYVA NTGGTVFQGS APRRIRLQMK ISVRPMIGTG NKSSSDEEHN 600 EDQEAVSAAG ENMDDTNTEG SVVAGPYNAE KIHFLPNDDE EPNSEALNHL ADEFQDKAKL 660 LDSDVGTKTS PVSIIKRRRV TPKQDDEMGD AVKGQSLQFG RAKTGSSPSV YVVCTAIFLI 720 LSVLFVGVWR GLKSDVM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 676 | 680 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35580.1 | 9e-74 | NAC family protein |