PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR86459.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

BES1

Protein Properties

Length: 359aa MW: 38341.9 Da PI: 8.9242

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR86459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	221.7	1.6e-68	2	154	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g sas sp+ss + s+ RWR86459.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWTVEEDGTTYRKGCKPLERMDVVGGSASPSPCSSFHPSPC 100 5899********************************************************************************************* PP DUF822 100 ssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsssl 150 +s+ +sp++sy++sp+sssfpsp s+ ++ + + +sl+p+l++ls++sss+ RWR86459.1 101 ASYNPSPCASYNPSPASSSFPSPGSSYAANGNTNadpNSLIPWLKNLSSSSSSA 154 *******************88766655544567********9977764 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG 60 WTVEEDGTTY RKGCKPLERM DVVGGSASPS PCSSFHPSPC ASYNPSPCAS YNPSPASSSF 120 PSPGSSYAAN GNTNADPNSL IPWLKNLSSS SSSASSSKLP HHLYIHAGSI SAPVTPPLSS 180 PTARTPRIKT DWDDSSAAPS PWGNHYSFLP SSTPPSPGRQ VLPDSGWLAG IRLPTVGPSS 240 PTFSLVSSNP FGYKEEALGG SGSRMWTPGQ SGTCSPAMTG PPIPADVHMS DVASNEFAFG 300 SNTVGLVKPW EGERIHEECG SDELELTLGS SHTRQCDVAT KRAKQSKGLK VPLPSVLKE

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WTVEEDGTTY RKGCKPLERM DVVGGSASPS PCSSFHPSPC ASYNPSPCAS YNPSPASSSF  120
PSPGSSYAAN GNTNADPNSL IPWLKNLSSS SSSASSSKLP HHLYIHAGSI SAPVTPPLSS  180
PTARTPRIKT DWDDSSAAPS PWGNHYSFLP SSTPPSPGRQ VLPDSGWLAG IRLPTVGPSS  240
PTFSLVSSNP FGYKEEALGG SGSRMWTPGQ SGTCSPAMTG PPIPADVHMS DVASNEFAFG  300
SNTVGLVKPW EGERIHEECG SDELELTLGS SHTRQCDVAT KRAKQSKGLK VPLPSVLKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-105	BES1 family protein