PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR86095.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 756aa    MW: 84664.4 Da    PI: 4.8799
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR86095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS395.17.7e-1213787501374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d +  ++lL+++++++   gd  qRla+y+++AL+arla+++se+y +l++++t+    +e l+a++l+  ++P+ k+s++ aN
  RWR86095.1 378 LRTLLIQCAQAVAANDRRTGSELLKQIRQHSHAFGDGQQRLAHYLANALEARLAGTGSEIYMQLASKQTT---AVEFLKAYHLYLAACPFKKISYFFAN 473
                 6789*************************************************************99999...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 q+Il+ ve++ r+Hi+Df+i++G+QWp++lq L  Rp+gpp+lRiTg+++p++g   ++++eetg+rLa++A++++vpfe+ +++++++e++++e+L++
  RWR86095.1 474 QTILDTVENAPRLHIVDFGIGYGFQWPCFLQRLGGRPSGPPKLRITGIDRPQPGfrPADRVEETGRRLADYAQTFNVPFEYVPIACSNWETIQVEDLNI 572
                 *************************************************************************************************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+l+Vn+ +q  +l de+v+++s+rd v k++++l+P+v+++   +  ++++ F++rf eal + sal+d+le+++pre+ er+ +Ere++gre++
  RWR86095.1 573 ESDEVLVVNCCFQFNKLADETVAIDSPRDIVFKTIRKLNPNVFIHGAINGAYSAPFFVTRFREALFHWSALYDMLETNVPREQPERMLIEREFFGREAM 671
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+acegaer+er et+++Wr r+++aG+ ++pl+++++k+a+  +r  + + + ++++ +++++gWk+r ++++S Wr
  RWR86095.1 672 NVIACEGAERVERPETYKQWRVRMMRAGLVQLPLNQDIMKKARDKVRSSYHKDFVIDQDGQWMLQGWKGRIIYALSTWR 750
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 756 aa     Download sequence    
MVMDPGFKEL SAIMNAEINF EDYYLDNGFR LEELFSHENV MGLPFASPDP SPSFDNDLPP  60
CLGVNPDGNS PEDGDIFSDI ALNYISQMLL EEDHDVQGSF NEESLALQAT ENSFYEVLGE  120
KYPPSPDQHP LHVDHDAESP EEYVGDGGYS NCTSGSSSSS SNADGSTVCE VGEYSSPQNV  180
ITAPRKCSCQ SPSFNSSNCS SSVVNGLEDS PTNKVGVSDF HSTSLPAWQF QRGKEEASKF  240
LPNGNALSLN LENARFLPLE PKEESHEVVE VKVEKKDERD HQGNGSRGRK NPHPDDLELE  300
GGRSNKQTAV FQEGTVRSEM FDRVLLCGEG QCGSELAEFR EALQNGVSKN SQNEQAKGSH  360
GGGKSRGKRQ GKREVVDLRT LLIQCAQAVA ANDRRTGSEL LKQIRQHSHA FGDGQQRLAH  420
YLANALEARL AGTGSEIYMQ LASKQTTAVE FLKAYHLYLA ACPFKKISYF FANQTILDTV  480
ENAPRLHIVD FGIGYGFQWP CFLQRLGGRP SGPPKLRITG IDRPQPGFRP ADRVEETGRR  540
LADYAQTFNV PFEYVPIACS NWETIQVEDL NIESDEVLVV NCCFQFNKLA DETVAIDSPR  600
DIVFKTIRKL NPNVFIHGAI NGAYSAPFFV TRFREALFHW SALYDMLETN VPREQPERML  660
IEREFFGREA MNVIACEGAE RVERPETYKQ WRVRMMRAGL VQLPLNQDIM KKARDKVRSS  720
YHKDFVIDQD GQWMLQGWKG RIIYALSTWR SDDGSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein